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Cluster: HRGMv2_4727_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4727_13 HRGMv2_4727_13_7 11495 12472 - GT2
STP HRGMv2_4727_13 HRGMv2_4727_13_8 12489 14804 - Fer4
TC HRGMv2_4727_13 HRGMv2_4727_13_9 14848 15993 - 9.B.183.1.9
CAZyme HRGMv2_4727_13 HRGMv2_4727_13_10 16011 16802 - GT111
TC HRGMv2_4727_13 HRGMv2_4727_13_11 16803 17492 - 9.B.18.1.2
TC HRGMv2_4727_13 HRGMv2_4727_13_12 17671 19137 - 2.A.66.2.16
pfam HRGMv2_4727_13 HRGMv2_4727_13_13 19137 20432 - UDPG_MGDP_dh | 3HCDH_N | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_4727_13 HRGMv2_4727_13_14 20519 21304 - GT111
Gene ID: HRGMv2_4727_13_7
Type: CAZyme
Location: 11495 - 12472 (-)
Gene ID: HRGMv2_4727_13_8
Type: STP
Location: 12489 - 14804 (-)
Gene ID: HRGMv2_4727_13_9
Type: TC
Location: 14848 - 15993 (-)
Gene ID: HRGMv2_4727_13_10
Type: CAZyme
Location: 16011 - 16802 (-)
Gene ID: HRGMv2_4727_13_11
Type: TC
Location: 16803 - 17492 (-)
Gene ID: HRGMv2_4727_13_12
Type: TC
Location: 17671 - 19137 (-)
Gene ID: HRGMv2_4727_13_13
Type: pfam
Location: 19137 - 20432 (-)
Gene ID: HRGMv2_4727_13_14
Type: CAZyme
Location: 20519 - 21304 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-273
→
Species
CAG-273 sp902496295

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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