Cluster: HRGMv2_4727_CGC6
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4727
- CGC Family ID: CGCFAM_10400
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4727_10 | HRGMv2_4727_10_19 | 19791 | 20714 | - | 8.A.21.2.2 |
| pfam | HRGMv2_4727_10 | HRGMv2_4727_10_20 | 20828 | 21274 | - | NfeD |
| pfam | HRGMv2_4727_10 | HRGMv2_4727_10_21 | 21545 | 23710 | + | ATP-cone | NRDD |
| CAZyme | HRGMv2_4727_10 | HRGMv2_4727_10_22 | 23780 | 26194 | + | GT4 |
| pfam | HRGMv2_4727_10 | HRGMv2_4727_10_23 | 26284 | 26772 | + | Alg14 |
| pfam | HRGMv2_4727_10 | HRGMv2_4727_10_24 | 26715 | 27230 | + | Glyco_tran_28_C |
| CAZyme | HRGMv2_4727_10 | HRGMv2_4727_10_25 | 27284 | 28423 | - | GT4 |
| TF | HRGMv2_4727_10 | HRGMv2_4727_10_26 | 28547 | 28771 | - | HTH_3 |
| NULL(UNKNOWN) | HRGMv2_4727_10 | HRGMv2_4727_10_27 | 29167 | 30576 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4727_10 | HRGMv2_4727_10_28 | 30734 | 31873 | + | 9.B.146.1.2 |
Gene ID: HRGMv2_4727_10_19
Type: TC
Location: 19791 - 20714 (-)
Type: TC
Location: 19791 - 20714 (-)
Gene ID: HRGMv2_4727_10_20
Type: pfam
Location: 20828 - 21274 (-)
Type: pfam
Location: 20828 - 21274 (-)
Gene ID: HRGMv2_4727_10_21
Type: pfam
Location: 21545 - 23710 (+)
Type: pfam
Location: 21545 - 23710 (+)
Gene ID: HRGMv2_4727_10_22
Type: CAZyme
Location: 23780 - 26194 (+)
Type: CAZyme
Location: 23780 - 26194 (+)
Gene ID: HRGMv2_4727_10_23
Type: pfam
Location: 26284 - 26772 (+)
Type: pfam
Location: 26284 - 26772 (+)
Gene ID: HRGMv2_4727_10_24
Type: pfam
Location: 26715 - 27230 (+)
Type: pfam
Location: 26715 - 27230 (+)
Gene ID: HRGMv2_4727_10_25
Type: CAZyme
Location: 27284 - 28423 (-)
Type: CAZyme
Location: 27284 - 28423 (-)
Gene ID: HRGMv2_4727_10_26
Type: TF
Location: 28547 - 28771 (-)
Type: TF
Location: 28547 - 28771 (-)
Gene ID: HRGMv2_4727_10_27
Type:
Location: 29167 - 30576 (+)
Type:
Location: 29167 - 30576 (+)
Gene ID: HRGMv2_4727_10_28
Type: TC
Location: 30734 - 31873 (+)
Type: TC
Location: 30734 - 31873 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-273
Species
CAG-273 sp902496295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.