dbCAN Logo

Cluster: HRGMv2_4727_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4727_9 HRGMv2_4727_9_42 41606 44173 - GT35
NULL(UNKNOWN) HRGMv2_4727_9 HRGMv2_4727_9_43 44450 44857 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4727_9 HRGMv2_4727_9_44 45400 46095 - GT51
pfam HRGMv2_4727_9 HRGMv2_4727_9_45 46184 47503 + MFS_1
NULL(UNKNOWN) HRGMv2_4727_9 HRGMv2_4727_9_46 47617 48498 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4727_9 HRGMv2_4727_9_47 48633 50510 - 4.C.1.1.4
STP HRGMv2_4727_9 HRGMv2_4727_9_48 50578 51147 - TetR_N
TC HRGMv2_4727_9 HRGMv2_4727_9_49 51157 52161 - 9.B.157.1.1
Gene ID: HRGMv2_4727_9_42
Type: CAZyme
Location: 41606 - 44173 (-)
Gene ID: HRGMv2_4727_9_43
Type:
Location: 44450 - 44857 (+)
Gene ID: HRGMv2_4727_9_44
Type: CAZyme
Location: 45400 - 46095 (-)
Gene ID: HRGMv2_4727_9_45
Type: pfam
Location: 46184 - 47503 (+)
Gene ID: HRGMv2_4727_9_46
Type:
Location: 47617 - 48498 (-)
Gene ID: HRGMv2_4727_9_47
Type: TC
Location: 48633 - 50510 (-)
Gene ID: HRGMv2_4727_9_48
Type: STP
Location: 50578 - 51147 (-)
Gene ID: HRGMv2_4727_9_49
Type: TC
Location: 51157 - 52161 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-273
→
Species
CAG-273 sp902496295

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4727_9_46 vegan > vegetarian 2.01611 0.00736

🧭 Explore Read Mapping of CGC

← Back to Cluster List