Cluster: HRGMv2_4727_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4727
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4727_4 | HRGMv2_4727_4_26 | 30575 | 32635 | + | 2.A.66.1.32 |
| pfam | HRGMv2_4727_4 | HRGMv2_4727_4_27 | 32780 | 32968 | + | Ribosomal_L32p |
| pfam | HRGMv2_4727_4 | HRGMv2_4727_4_28 | 33124 | 33621 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | HRGMv2_4727_4 | HRGMv2_4727_4_29 | 33701 | 35164 | + | GH13_5 |
| pfam | HRGMv2_4727_4 | HRGMv2_4727_4_30 | 35330 | 36658 | + | GTP_EFTU | GTP_EFTU | MMR_HSR1 | MMR_HSR1 | FeoB_N | FeoB_N | AIG1 | KH_dom-like |
| TC | HRGMv2_4727_4 | HRGMv2_4727_4_31 | 36764 | 37408 | + | 9.B.31.1.2 |
Gene ID: HRGMv2_4727_4_26
Type: TC
Location: 30575 - 32635 (+)
Type: TC
Location: 30575 - 32635 (+)
Gene ID: HRGMv2_4727_4_27
Type: pfam
Location: 32780 - 32968 (+)
Type: pfam
Location: 32780 - 32968 (+)
Gene ID: HRGMv2_4727_4_28
Type: pfam
Location: 33124 - 33621 (+)
Type: pfam
Location: 33124 - 33621 (+)
Gene ID: HRGMv2_4727_4_29
Type: CAZyme
Location: 33701 - 35164 (+)
Type: CAZyme
Location: 33701 - 35164 (+)
Gene ID: HRGMv2_4727_4_30
Type: pfam
Location: 35330 - 36658 (+)
Type: pfam
Location: 35330 - 36658 (+)
Gene ID: HRGMv2_4727_4_31
Type: TC
Location: 36764 - 37408 (+)
Type: TC
Location: 36764 - 37408 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-273
Species
CAG-273 sp902496295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.