Cluster: HRGMv2_4726_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4726
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4726_18 | HRGMv2_4726_18_7 | 5497 | 7461 | - | GH15 |
| pfam | HRGMv2_4726_18 | HRGMv2_4726_18_8 | 7556 | 9199 | - | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_6 |
| NULL(UNKNOWN) | HRGMv2_4726_18 | HRGMv2_4726_18_9 | 9276 | 10859 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4726_18 | HRGMv2_4726_18_10 | 10941 | 13388 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_4726_18_7
Type: CAZyme
Location: 5497 - 7461 (-)
Type: CAZyme
Location: 5497 - 7461 (-)
Gene ID: HRGMv2_4726_18_8
Type: pfam
Location: 7556 - 9199 (-)
Type: pfam
Location: 7556 - 9199 (-)
Gene ID: HRGMv2_4726_18_9
Type:
Location: 9276 - 10859 (-)
Type:
Location: 9276 - 10859 (-)
Gene ID: HRGMv2_4726_18_10
Type: TC
Location: 10941 - 13388 (-)
Type: TC
Location: 10941 - 13388 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4726_18_7 | vegan > omnivore | 1.09657 | 0.01497 |
| HRGMv2_4726_18_10 | vegan > omnivore | 1.02179 | 0.01497 |