Cluster: HRGMv2_4726_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4726
- CGC Family ID: CGCFAM_00600
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4726_6 | HRGMv2_4726_6_8 | 6031 | 6741 | + | 9.B.18.1.2 |
| pfam | HRGMv2_4726_6 | HRGMv2_4726_6_9 | 6771 | 7829 | + | NTP_transferase |
| CAZyme | HRGMv2_4726_6 | HRGMv2_4726_6_10 | 7904 | 8989 | + | GT4 |
| CAZyme | HRGMv2_4726_6 | HRGMv2_4726_6_11 | 8986 | 10200 | + | GT4 |
| pfam | HRGMv2_4726_6 | HRGMv2_4726_6_12 | 10204 | 10692 | + | Hexapep | Hexapep_2 |
| NULL(UNKNOWN) | HRGMv2_4726_6 | HRGMv2_4726_6_13 | 10717 | 11814 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4726_6 | HRGMv2_4726_6_14 | 11771 | 12877 | + | GT4 |
| pfam | HRGMv2_4726_6 | HRGMv2_4726_6_15 | 12891 | 13883 | + | Stealth_CR2 | Stealth_CR1 | Stealth_CR3 |
| pfam | HRGMv2_4726_6 | HRGMv2_4726_6_16 | 13890 | 14897 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_4726_6 | HRGMv2_4726_6_17 | 14917 | 15792 | + | GT2 |
| pfam | HRGMv2_4726_6 | HRGMv2_4726_6_18 | 15789 | 16421 | + | Hexapep | Hexapep_2 |
| pfam | HRGMv2_4726_6 | HRGMv2_4726_6_19 | 16437 | 17075 | + | Hexapep |
| TC | HRGMv2_4726_6 | HRGMv2_4726_6_20 | 17098 | 18543 | + | 2.A.66.2.16 |
Gene ID: HRGMv2_4726_6_8
Type: TC
Location: 6031 - 6741 (+)
Type: TC
Location: 6031 - 6741 (+)
Gene ID: HRGMv2_4726_6_9
Type: pfam
Location: 6771 - 7829 (+)
Type: pfam
Location: 6771 - 7829 (+)
Gene ID: HRGMv2_4726_6_10
Type: CAZyme
Location: 7904 - 8989 (+)
Type: CAZyme
Location: 7904 - 8989 (+)
Gene ID: HRGMv2_4726_6_11
Type: CAZyme
Location: 8986 - 10200 (+)
Type: CAZyme
Location: 8986 - 10200 (+)
Gene ID: HRGMv2_4726_6_12
Type: pfam
Location: 10204 - 10692 (+)
Type: pfam
Location: 10204 - 10692 (+)
Gene ID: HRGMv2_4726_6_13
Type:
Location: 10717 - 11814 (+)
Type:
Location: 10717 - 11814 (+)
Gene ID: HRGMv2_4726_6_14
Type: CAZyme
Location: 11771 - 12877 (+)
Type: CAZyme
Location: 11771 - 12877 (+)
Gene ID: HRGMv2_4726_6_15
Type: pfam
Location: 12891 - 13883 (+)
Type: pfam
Location: 12891 - 13883 (+)
Gene ID: HRGMv2_4726_6_16
Type: pfam
Location: 13890 - 14897 (+)
Type: pfam
Location: 13890 - 14897 (+)
Gene ID: HRGMv2_4726_6_17
Type: CAZyme
Location: 14917 - 15792 (+)
Type: CAZyme
Location: 14917 - 15792 (+)
Gene ID: HRGMv2_4726_6_18
Type: pfam
Location: 15789 - 16421 (+)
Type: pfam
Location: 15789 - 16421 (+)
Gene ID: HRGMv2_4726_6_19
Type: pfam
Location: 16437 - 17075 (+)
Type: pfam
Location: 16437 - 17075 (+)
Gene ID: HRGMv2_4726_6_20
Type: TC
Location: 17098 - 18543 (+)
Type: TC
Location: 17098 - 18543 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.