Cluster: HRGMv2_4726_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_4726
- CGC Family ID: CGCFAM_02199
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4726_3 | HRGMv2_4726_3_36 | 39286 | 42354 | - | GH25 |
| CAZyme | HRGMv2_4726_3 | HRGMv2_4726_3_37 | 42367 | 43404 | - | GT2 |
| pfam | HRGMv2_4726_3 | HRGMv2_4726_3_38 | 43445 | 43783 | - | DUF2304 |
| CAZyme | HRGMv2_4726_3 | HRGMv2_4726_3_39 | 43804 | 44493 | - | GT2 |
| pfam | HRGMv2_4726_3 | HRGMv2_4726_3_40 | 44510 | 46054 | - | DUF2142 |
| CAZyme | HRGMv2_4726_3 | HRGMv2_4726_3_41 | 46068 | 48290 | - | GT2 |
| CAZyme | HRGMv2_4726_3 | HRGMv2_4726_3_42 | 48340 | 50103 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4726_3 | HRGMv2_4726_3_43 | 50121 | 51608 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4726_3 | HRGMv2_4726_3_44 | 51629 | 52543 | - | Lactamase_B |
| TC | HRGMv2_4726_3 | HRGMv2_4726_3_45 | 52564 | 53916 | - | 3.A.1.103.6 |
| CAZyme | HRGMv2_4726_3 | HRGMv2_4726_3_46 | 53947 | 54936 | - | GT2 |
| pfam | HRGMv2_4726_3 | HRGMv2_4726_3_47 | 54956 | 55747 | - | ABC2_membrane |
| CAZyme | HRGMv2_4726_3 | HRGMv2_4726_3_48 | 55931 | 56914 | - | GT2 |
Gene ID: HRGMv2_4726_3_36
Type: CAZyme
Location: 39286 - 42354 (-)
Type: CAZyme
Location: 39286 - 42354 (-)
Gene ID: HRGMv2_4726_3_37
Type: CAZyme
Location: 42367 - 43404 (-)
Type: CAZyme
Location: 42367 - 43404 (-)
Gene ID: HRGMv2_4726_3_38
Type: pfam
Location: 43445 - 43783 (-)
Type: pfam
Location: 43445 - 43783 (-)
Gene ID: HRGMv2_4726_3_39
Type: CAZyme
Location: 43804 - 44493 (-)
Type: CAZyme
Location: 43804 - 44493 (-)
Gene ID: HRGMv2_4726_3_40
Type: pfam
Location: 44510 - 46054 (-)
Type: pfam
Location: 44510 - 46054 (-)
Gene ID: HRGMv2_4726_3_41
Type: CAZyme
Location: 46068 - 48290 (-)
Type: CAZyme
Location: 46068 - 48290 (-)
Gene ID: HRGMv2_4726_3_42
Type: CAZyme
Location: 48340 - 50103 (-)
Type: CAZyme
Location: 48340 - 50103 (-)
Gene ID: HRGMv2_4726_3_43
Type:
Location: 50121 - 51608 (-)
Type:
Location: 50121 - 51608 (-)
Gene ID: HRGMv2_4726_3_44
Type: pfam
Location: 51629 - 52543 (-)
Type: pfam
Location: 51629 - 52543 (-)
Gene ID: HRGMv2_4726_3_45
Type: TC
Location: 52564 - 53916 (-)
Type: TC
Location: 52564 - 53916 (-)
Gene ID: HRGMv2_4726_3_46
Type: CAZyme
Location: 53947 - 54936 (-)
Type: CAZyme
Location: 53947 - 54936 (-)
Gene ID: HRGMv2_4726_3_47
Type: pfam
Location: 54956 - 55747 (-)
Type: pfam
Location: 54956 - 55747 (-)
Gene ID: HRGMv2_4726_3_48
Type: CAZyme
Location: 55931 - 56914 (-)
Type: CAZyme
Location: 55931 - 56914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.