Cluster: HRGMv2_4725_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4725
- CGC Family ID: CGCFAM_02968
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4725_11 | HRGMv2_4725_11_12 | 7502 | 8221 | - | 3.A.1.25.6 |
| NULL(UNKNOWN) | HRGMv2_4725_11 | HRGMv2_4725_11_13 | 8208 | 8330 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4725_11 | HRGMv2_4725_11_14 | 8335 | 9609 | - | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_4725_11 | HRGMv2_4725_11_15 | 10341 | 11444 | - | GT2 |
Gene ID: HRGMv2_4725_11_12
Type: TC
Location: 7502 - 8221 (-)
Type: TC
Location: 7502 - 8221 (-)
Gene ID: HRGMv2_4725_11_13
Type:
Location: 8208 - 8330 (-)
Type:
Location: 8208 - 8330 (-)
Gene ID: HRGMv2_4725_11_14
Type: pfam
Location: 8335 - 9609 (-)
Type: pfam
Location: 8335 - 9609 (-)
Gene ID: HRGMv2_4725_11_15
Type: CAZyme
Location: 10341 - 11444 (-)
Type: CAZyme
Location: 10341 - 11444 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.