Cluster: HRGMv2_4725_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4725
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4725_4 | HRGMv2_4725_4_89 | 77484 | 79319 | + | 3.A.3.6.10 |
| TC | HRGMv2_4725_4 | HRGMv2_4725_4_90 | 79314 | 80108 | - | 3.A.3.4.1 |
| TC | HRGMv2_4725_4 | HRGMv2_4725_4_91 | 80077 | 81933 | - | 3.A.3.4.1 |
| CAZyme | HRGMv2_4725_4 | HRGMv2_4725_4_92 | 82054 | 83313 | - | GH144 |
Gene ID: HRGMv2_4725_4_89
Type: TC
Location: 77484 - 79319 (+)
Type: TC
Location: 77484 - 79319 (+)
Gene ID: HRGMv2_4725_4_90
Type: TC
Location: 79314 - 80108 (-)
Type: TC
Location: 79314 - 80108 (-)
Gene ID: HRGMv2_4725_4_91
Type: TC
Location: 80077 - 81933 (-)
Type: TC
Location: 80077 - 81933 (-)
Gene ID: HRGMv2_4725_4_92
Type: CAZyme
Location: 82054 - 83313 (-)
Type: CAZyme
Location: 82054 - 83313 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.