Cluster: HRGMv2_4725_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4725
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4725_2 | HRGMv2_4725_2_122 | 95460 | 97352 | - | GH15 |
| pfam | HRGMv2_4725_2 | HRGMv2_4725_2_123 | 97423 | 99069 | - | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_2 | Lactamase_B_6 |
| NULL(UNKNOWN) | HRGMv2_4725_2 | HRGMv2_4725_2_124 | 99082 | 100590 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4725_2 | HRGMv2_4725_2_125 | 100643 | 102925 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_4725_2_122
Type: CAZyme
Location: 95460 - 97352 (-)
Type: CAZyme
Location: 95460 - 97352 (-)
Gene ID: HRGMv2_4725_2_123
Type: pfam
Location: 97423 - 99069 (-)
Type: pfam
Location: 97423 - 99069 (-)
Gene ID: HRGMv2_4725_2_124
Type:
Location: 99082 - 100590 (-)
Type:
Location: 99082 - 100590 (-)
Gene ID: HRGMv2_4725_2_125
Type: TC
Location: 100643 - 102925 (-)
Type: TC
Location: 100643 - 102925 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.