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Cluster: HRGMv2_4724_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4724_31 HRGMv2_4724_31_10 9343 10272 + 3.A.1.5.11
TC HRGMv2_4724_31 HRGMv2_4724_31_11 10288 11142 + 3.A.1.5.39
TC HRGMv2_4724_31 HRGMv2_4724_31_12 11159 12154 + 3.A.1.5.37
TC HRGMv2_4724_31 HRGMv2_4724_31_13 12151 13140 + 3.A.1.5.15
NULL(UNKNOWN) HRGMv2_4724_31 HRGMv2_4724_31_14 13137 13733 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4724_31 HRGMv2_4724_31_15 13842 15359 + 3.A.1.5.20
peptidase HRGMv2_4724_31 HRGMv2_4724_31_16 15444 16832 - S12.UPW
pfam HRGMv2_4724_31 HRGMv2_4724_31_17 16887 18023 - CbiZ
CAZyme HRGMv2_4724_31 HRGMv2_4724_31_18 18276 20564 - GH57
Gene ID: HRGMv2_4724_31_10
Type: TC
Location: 9343 - 10272 (+)
Gene ID: HRGMv2_4724_31_11
Type: TC
Location: 10288 - 11142 (+)
Gene ID: HRGMv2_4724_31_12
Type: TC
Location: 11159 - 12154 (+)
Gene ID: HRGMv2_4724_31_13
Type: TC
Location: 12151 - 13140 (+)
Gene ID: HRGMv2_4724_31_14
Type:
Location: 13137 - 13733 (+)
Gene ID: HRGMv2_4724_31_15
Type: TC
Location: 13842 - 15359 (+)
Gene ID: HRGMv2_4724_31_16
Type: peptidase
Location: 15444 - 16832 (-)
Gene ID: HRGMv2_4724_31_17
Type: pfam
Location: 16887 - 18023 (-)
Gene ID: HRGMv2_4724_31_18
Type: CAZyme
Location: 18276 - 20564 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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