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Cluster: HRGMv2_4724_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4724_25 HRGMv2_4724_25_3 1301 2338 + GT8
CAZyme HRGMv2_4724_25 HRGMv2_4724_25_4 2341 3444 + GT4
STP HRGMv2_4724_25 HRGMv2_4724_25_5 3685 4653 + SIS
STP HRGMv2_4724_25 HRGMv2_4724_25_6 4660 5532 + PfkB
TC HRGMv2_4724_25 HRGMv2_4724_25_7 5603 6880 + 3.A.1.1.44
TC HRGMv2_4724_25 HRGMv2_4724_25_8 7024 7908 + 3.A.1.1.36
TC HRGMv2_4724_25 HRGMv2_4724_25_9 8015 8854 + 3.A.1.1.18
pfam HRGMv2_4724_25 HRGMv2_4724_25_10 8865 9689 + AP_endonuc_2
TC HRGMv2_4724_25 HRGMv2_4724_25_11 9712 10821 + 3.A.1.1.22
TC HRGMv2_4724_25 HRGMv2_4724_25_12 11212 12705 + 4.C.1.1.4
TC HRGMv2_4724_25 HRGMv2_4724_25_13 12828 14327 + 4.C.1.1.4
Gene ID: HRGMv2_4724_25_3
Type: CAZyme
Location: 1301 - 2338 (+)
Gene ID: HRGMv2_4724_25_4
Type: CAZyme
Location: 2341 - 3444 (+)
Gene ID: HRGMv2_4724_25_5
Type: STP
Location: 3685 - 4653 (+)
Gene ID: HRGMv2_4724_25_6
Type: STP
Location: 4660 - 5532 (+)
Gene ID: HRGMv2_4724_25_7
Type: TC
Location: 5603 - 6880 (+)
Gene ID: HRGMv2_4724_25_8
Type: TC
Location: 7024 - 7908 (+)
Gene ID: HRGMv2_4724_25_9
Type: TC
Location: 8015 - 8854 (+)
Gene ID: HRGMv2_4724_25_10
Type: pfam
Location: 8865 - 9689 (+)
Gene ID: HRGMv2_4724_25_11
Type: TC
Location: 9712 - 10821 (+)
Gene ID: HRGMv2_4724_25_12
Type: TC
Location: 11212 - 12705 (+)
Gene ID: HRGMv2_4724_25_13
Type: TC
Location: 12828 - 14327 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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