Cluster: HRGMv2_4724_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4724
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4724_70 | HRGMv2_4724_70_4 | 3230 | 4534 | + | GT30 |
| NULL(UNKNOWN) | HRGMv2_4724_70 | HRGMv2_4724_70_5 | 4602 | 5813 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4724_70 | HRGMv2_4724_70_6 | 5810 | 6319 | + | tRNA_edit |
| TC | HRGMv2_4724_70 | HRGMv2_4724_70_7 | 6439 | 8601 | - | 1.B.52.2.2 |
Gene ID: HRGMv2_4724_70_4
Type: CAZyme
Location: 3230 - 4534 (+)
Type: CAZyme
Location: 3230 - 4534 (+)
Gene ID: HRGMv2_4724_70_5
Type:
Location: 4602 - 5813 (+)
Type:
Location: 4602 - 5813 (+)
Gene ID: HRGMv2_4724_70_6
Type: pfam
Location: 5810 - 6319 (+)
Type: pfam
Location: 5810 - 6319 (+)
Gene ID: HRGMv2_4724_70_7
Type: TC
Location: 6439 - 8601 (-)
Type: TC
Location: 6439 - 8601 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Aminobacteriaceae
Genus
Fretibacterium
Species
Fretibacterium sp938030725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.