Cluster: HRGMv2_4724_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4724
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4724_1 | HRGMv2_4724_1_5 | 3515 | 5251 | + | GT26 |
| pfam | HRGMv2_4724_1 | HRGMv2_4724_1_6 | 5260 | 5721 | + | SPOUT_MTase |
| TC | HRGMv2_4724_1 | HRGMv2_4724_1_7 | 5837 | 7933 | - | 3.A.16.1.1 |
| CAZyme | HRGMv2_4724_1 | HRGMv2_4724_1_8 | 7970 | 8650 | - | CE4 |
Gene ID: HRGMv2_4724_1_5
Type: CAZyme
Location: 3515 - 5251 (+)
Type: CAZyme
Location: 3515 - 5251 (+)
Gene ID: HRGMv2_4724_1_6
Type: pfam
Location: 5260 - 5721 (+)
Type: pfam
Location: 5260 - 5721 (+)
Gene ID: HRGMv2_4724_1_7
Type: TC
Location: 5837 - 7933 (-)
Type: TC
Location: 5837 - 7933 (-)
Gene ID: HRGMv2_4724_1_8
Type: CAZyme
Location: 7970 - 8650 (-)
Type: CAZyme
Location: 7970 - 8650 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Aminobacteriaceae
Genus
Fretibacterium
Species
Fretibacterium sp938030725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.