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Cluster: HRGMv2_4713_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4713_5 HRGMv2_4713_5_1 455 1051 + 3.D.3.1.1
TC HRGMv2_4713_5 HRGMv2_4713_5_2 1059 2315 + 3.E.2.1.1
TC HRGMv2_4713_5 HRGMv2_4713_5_3 2317 3156 + 3.D.3.3.1
CAZyme HRGMv2_4713_5 HRGMv2_4713_5_4 3089 3832 - GT51
pfam HRGMv2_4713_5 HRGMv2_4713_5_5 3969 4463 + Cytochrom_C
CAZyme HRGMv2_4713_5 HRGMv2_4713_5_6 4471 5616 - CE9
STP HRGMv2_4713_5 HRGMv2_4713_5_7 5692 6321 - TetR_N
TC HRGMv2_4713_5 HRGMv2_4713_5_8 6414 7856 + 1.B.17.3.6
TC HRGMv2_4713_5 HRGMv2_4713_5_9 7878 9083 + 2.A.1.3.24
TC HRGMv2_4713_5 HRGMv2_4713_5_10 9061 10662 + 2.A.1.3.62
TC HRGMv2_4713_5 HRGMv2_4713_5_11 10759 11952 + 2.A.41.2.11
NULL(UNKNOWN) HRGMv2_4713_5 HRGMv2_4713_5_12 11956 12183 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4713_5 HRGMv2_4713_5_13 12146 13492 + 2.A.40.7.6
pfam HRGMv2_4713_5 HRGMv2_4713_5_14 13497 14618 + NUP
pfam HRGMv2_4713_5 HRGMv2_4713_5_15 14655 15668 + A_deaminase | AMP_deaminase
CAZyme HRGMv2_4713_5 HRGMv2_4713_5_16 15757 16911 + GT21
Gene ID: HRGMv2_4713_5_1
Type: TC
Location: 455 - 1051 (+)
Gene ID: HRGMv2_4713_5_2
Type: TC
Location: 1059 - 2315 (+)
Gene ID: HRGMv2_4713_5_3
Type: TC
Location: 2317 - 3156 (+)
Gene ID: HRGMv2_4713_5_4
Type: CAZyme
Location: 3089 - 3832 (-)
Gene ID: HRGMv2_4713_5_5
Type: pfam
Location: 3969 - 4463 (+)
Gene ID: HRGMv2_4713_5_6
Type: CAZyme
Location: 4471 - 5616 (-)
Gene ID: HRGMv2_4713_5_7
Type: STP
Location: 5692 - 6321 (-)
Gene ID: HRGMv2_4713_5_8
Type: TC
Location: 6414 - 7856 (+)
Gene ID: HRGMv2_4713_5_9
Type: TC
Location: 7878 - 9083 (+)
Gene ID: HRGMv2_4713_5_10
Type: TC
Location: 9061 - 10662 (+)
Gene ID: HRGMv2_4713_5_11
Type: TC
Location: 10759 - 11952 (+)
Gene ID: HRGMv2_4713_5_12
Type:
Location: 11956 - 12183 (+)
Gene ID: HRGMv2_4713_5_13
Type: TC
Location: 12146 - 13492 (+)
Gene ID: HRGMv2_4713_5_14
Type: pfam
Location: 13497 - 14618 (+)
Gene ID: HRGMv2_4713_5_15
Type: pfam
Location: 14655 - 15668 (+)
Gene ID: HRGMv2_4713_5_16
Type: CAZyme
Location: 15757 - 16911 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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