dbCAN Logo

Cluster: HRGMv2_4713_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4713_4 HRGMv2_4713_4_4 2113 2424 + 3.A.6.2.1
pfam HRGMv2_4713_4 HRGMv2_4713_4_5 2430 2741 + FliO
TC HRGMv2_4713_4 HRGMv2_4713_4_6 2746 3696 + 3.A.6.2.1
TC HRGMv2_4713_4 HRGMv2_4713_4_7 3693 3968 + 3.A.6.2.1
pfam HRGMv2_4713_4 HRGMv2_4713_4_8 3982 4779 + Bac_export_1
TC HRGMv2_4713_4 HRGMv2_4713_4_9 4769 5911 + 3.A.6.2.1
pfam HRGMv2_4713_4 HRGMv2_4713_4_10 6013 7707 + FliD_N | FliD_C | Flagellin_IN
pfam HRGMv2_4713_4 HRGMv2_4713_4_11 7748 8137 + FliS
TC HRGMv2_4713_4 HRGMv2_4713_4_12 8230 9288 - 2.A.86.2.1
CAZyme HRGMv2_4713_4 HRGMv2_4713_4_13 9348 12728 - CE4 | GH18 | GT2
Gene ID: HRGMv2_4713_4_4
Type: TC
Location: 2113 - 2424 (+)
Gene ID: HRGMv2_4713_4_5
Type: pfam
Location: 2430 - 2741 (+)
Gene ID: HRGMv2_4713_4_6
Type: TC
Location: 2746 - 3696 (+)
Gene ID: HRGMv2_4713_4_7
Type: TC
Location: 3693 - 3968 (+)
Gene ID: HRGMv2_4713_4_8
Type: pfam
Location: 3982 - 4779 (+)
Gene ID: HRGMv2_4713_4_9
Type: TC
Location: 4769 - 5911 (+)
Gene ID: HRGMv2_4713_4_10
Type: pfam
Location: 6013 - 7707 (+)
Gene ID: HRGMv2_4713_4_11
Type: pfam
Location: 7748 - 8137 (+)
Gene ID: HRGMv2_4713_4_12
Type: TC
Location: 8230 - 9288 (-)
Gene ID: HRGMv2_4713_4_13
Type: CAZyme
Location: 9348 - 12728 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List