Cluster: HRGMv2_4712_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4712
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4712_16 | HRGMv2_4712_16_4 | 2949 | 4340 | + | 2.A.66.1.28 |
| pfam | HRGMv2_4712_16 | HRGMv2_4712_16_5 | 4372 | 5646 | + | RmuC |
| pfam | HRGMv2_4712_16 | HRGMv2_4712_16_6 | 5649 | 6689 | + | OTCace | OTCace_N |
| TC | HRGMv2_4712_16 | HRGMv2_4712_16_7 | 6686 | 8296 | + | 3.A.1.210.2 |
| STP | HRGMv2_4712_16 | HRGMv2_4712_16_8 | 8310 | 8900 | - | TetR_N |
| TC | HRGMv2_4712_16 | HRGMv2_4712_16_9 | 9223 | 11802 | + | 3.A.9.1.2 |
| pfam | HRGMv2_4712_16 | HRGMv2_4712_16_10 | 11781 | 12416 | - | NTP_transf_3 |
| CAZyme | HRGMv2_4712_16 | HRGMv2_4712_16_11 | 12437 | 14971 | - | GT35 |
Gene ID: HRGMv2_4712_16_4
Type: TC
Location: 2949 - 4340 (+)
Type: TC
Location: 2949 - 4340 (+)
Gene ID: HRGMv2_4712_16_5
Type: pfam
Location: 4372 - 5646 (+)
Type: pfam
Location: 4372 - 5646 (+)
Gene ID: HRGMv2_4712_16_6
Type: pfam
Location: 5649 - 6689 (+)
Type: pfam
Location: 5649 - 6689 (+)
Gene ID: HRGMv2_4712_16_7
Type: TC
Location: 6686 - 8296 (+)
Type: TC
Location: 6686 - 8296 (+)
Gene ID: HRGMv2_4712_16_8
Type: STP
Location: 8310 - 8900 (-)
Type: STP
Location: 8310 - 8900 (-)
Gene ID: HRGMv2_4712_16_9
Type: TC
Location: 9223 - 11802 (+)
Type: TC
Location: 9223 - 11802 (+)
Gene ID: HRGMv2_4712_16_10
Type: pfam
Location: 11781 - 12416 (-)
Type: pfam
Location: 11781 - 12416 (-)
Gene ID: HRGMv2_4712_16_11
Type: CAZyme
Location: 12437 - 14971 (-)
Type: CAZyme
Location: 12437 - 14971 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Sphaerochaetales
Family
Sphaerochaetaceae
Genus
UBA9732
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.