Cluster: HRGMv2_4712_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4712
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4712_10 | HRGMv2_4712_10_5 | 4761 | 5642 | + | 3.A.1.1.41 |
| TC | HRGMv2_4712_10 | HRGMv2_4712_10_6 | 5639 | 6487 | + | 3.A.1.1.6 |
| STP | HRGMv2_4712_10 | HRGMv2_4712_10_7 | 6541 | 7731 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_4712_10 | HRGMv2_4712_10_8 | 7754 | 10732 | + | GH38 |
| CAZyme | HRGMv2_4712_10 | HRGMv2_4712_10_9 | 10763 | 12049 | - | GH109 |
| pfam | HRGMv2_4712_10 | HRGMv2_4712_10_10 | 12103 | 13239 | + | APH |
| NULL(UNKNOWN) | HRGMv2_4712_10 | HRGMv2_4712_10_11 | 13223 | 13423 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4712_10 | HRGMv2_4712_10_12 | 13440 | 16145 | - | 3.A.1.3.25 |
Gene ID: HRGMv2_4712_10_5
Type: TC
Location: 4761 - 5642 (+)
Type: TC
Location: 4761 - 5642 (+)
Gene ID: HRGMv2_4712_10_6
Type: TC
Location: 5639 - 6487 (+)
Type: TC
Location: 5639 - 6487 (+)
Gene ID: HRGMv2_4712_10_7
Type: STP
Location: 6541 - 7731 (+)
Type: STP
Location: 6541 - 7731 (+)
Gene ID: HRGMv2_4712_10_8
Type: CAZyme
Location: 7754 - 10732 (+)
Type: CAZyme
Location: 7754 - 10732 (+)
Gene ID: HRGMv2_4712_10_9
Type: CAZyme
Location: 10763 - 12049 (-)
Type: CAZyme
Location: 10763 - 12049 (-)
Gene ID: HRGMv2_4712_10_10
Type: pfam
Location: 12103 - 13239 (+)
Type: pfam
Location: 12103 - 13239 (+)
Gene ID: HRGMv2_4712_10_11
Type:
Location: 13223 - 13423 (-)
Type:
Location: 13223 - 13423 (-)
Gene ID: HRGMv2_4712_10_12
Type: TC
Location: 13440 - 16145 (-)
Type: TC
Location: 13440 - 16145 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Sphaerochaetales
Family
Sphaerochaetaceae
Genus
UBA9732
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.