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Cluster: HRGMv2_4712_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4712_3 HRGMv2_4712_3_54 61373 63202 + 3.A.1.111.2
TC HRGMv2_4712_3 HRGMv2_4712_3_55 63192 65072 + 3.A.1.111.2
TC HRGMv2_4712_3 HRGMv2_4712_3_56 65336 66769 + 2.A.66.1.32
pfam HRGMv2_4712_3 HRGMv2_4712_3_57 67218 68432 + ROK
CAZyme HRGMv2_4712_3 HRGMv2_4712_3_58 68764 69810 + GH179
pfam HRGMv2_4712_3 HRGMv2_4712_3_59 69857 70822 + TctC
pfam HRGMv2_4712_3 HRGMv2_4712_3_60 70983 71480 + TctB
TC HRGMv2_4712_3 HRGMv2_4712_3_61 71491 73011 + 2.A.80.1.1
Gene ID: HRGMv2_4712_3_54
Type: TC
Location: 61373 - 63202 (+)
Gene ID: HRGMv2_4712_3_55
Type: TC
Location: 63192 - 65072 (+)
Gene ID: HRGMv2_4712_3_56
Type: TC
Location: 65336 - 66769 (+)
Gene ID: HRGMv2_4712_3_57
Type: pfam
Location: 67218 - 68432 (+)
Gene ID: HRGMv2_4712_3_58
Type: CAZyme
Location: 68764 - 69810 (+)
Gene ID: HRGMv2_4712_3_59
Type: pfam
Location: 69857 - 70822 (+)
Gene ID: HRGMv2_4712_3_60
Type: pfam
Location: 70983 - 71480 (+)
Gene ID: HRGMv2_4712_3_61
Type: TC
Location: 71491 - 73011 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Sphaerochaetales
→
Family
Sphaerochaetaceae
→
Genus
UBA9732
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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