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Cluster: HRGMv2_4712_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4712_2 HRGMv2_4712_2_52 47916 49313 + AA7
TC HRGMv2_4712_2 HRGMv2_4712_2_53 49407 50693 + 2.A.1.84.2
pfam HRGMv2_4712_2 HRGMv2_4712_2_54 50769 51275 + DUF1003
pfam HRGMv2_4712_2 HRGMv2_4712_2_55 51700 52584 + PDDEXK_2
TC HRGMv2_4712_2 HRGMv2_4712_2_56 53139 54800 + 3.A.1.5.11
TC HRGMv2_4712_2 HRGMv2_4712_2_57 54865 55827 + 3.A.1.5.11
TC HRGMv2_4712_2 HRGMv2_4712_2_58 55827 56684 + 3.A.1.5.20
TC HRGMv2_4712_2 HRGMv2_4712_2_59 56699 56962 + 3.A.1.5.35
TC HRGMv2_4712_2 HRGMv2_4712_2_60 56959 57699 + 3.A.1.5.15
TC HRGMv2_4712_2 HRGMv2_4712_2_61 57699 58733 + 3.A.1.5.20
Gene ID: HRGMv2_4712_2_52
Type: CAZyme
Location: 47916 - 49313 (+)
Gene ID: HRGMv2_4712_2_53
Type: TC
Location: 49407 - 50693 (+)
Gene ID: HRGMv2_4712_2_54
Type: pfam
Location: 50769 - 51275 (+)
Gene ID: HRGMv2_4712_2_55
Type: pfam
Location: 51700 - 52584 (+)
Gene ID: HRGMv2_4712_2_56
Type: TC
Location: 53139 - 54800 (+)
Gene ID: HRGMv2_4712_2_57
Type: TC
Location: 54865 - 55827 (+)
Gene ID: HRGMv2_4712_2_58
Type: TC
Location: 55827 - 56684 (+)
Gene ID: HRGMv2_4712_2_59
Type: TC
Location: 56699 - 56962 (+)
Gene ID: HRGMv2_4712_2_60
Type: TC
Location: 56959 - 57699 (+)
Gene ID: HRGMv2_4712_2_61
Type: TC
Location: 57699 - 58733 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Sphaerochaetales
→
Family
Sphaerochaetaceae
→
Genus
UBA9732
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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