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Cluster: HRGMv2_4709_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4709_4 HRGMv2_4709_4_27 35676 37433 - GH9
CAZyme HRGMv2_4709_4 HRGMv2_4709_4_28 37446 38228 - GH16_21
CAZyme HRGMv2_4709_4 HRGMv2_4709_4_29 38272 39687 - GH1
TC HRGMv2_4709_4 HRGMv2_4709_4_30 39684 40010 - 4.A.3.2.6
TC HRGMv2_4709_4 HRGMv2_4709_4_31 40017 40319 - 4.A.3.2.6
TC HRGMv2_4709_4 HRGMv2_4709_4_32 40380 41672 - 1.B.23.1.3
TC HRGMv2_4709_4 HRGMv2_4709_4_33 41733 43058 - 4.A.3.2.8
Gene ID: HRGMv2_4709_4_27
Type: CAZyme
Location: 35676 - 37433 (-)
Gene ID: HRGMv2_4709_4_28
Type: CAZyme
Location: 37446 - 38228 (-)
Gene ID: HRGMv2_4709_4_29
Type: CAZyme
Location: 38272 - 39687 (-)
Gene ID: HRGMv2_4709_4_30
Type: TC
Location: 39684 - 40010 (-)
Gene ID: HRGMv2_4709_4_31
Type: TC
Location: 40017 - 40319 (-)
Gene ID: HRGMv2_4709_4_32
Type: TC
Location: 40380 - 41672 (-)
Gene ID: HRGMv2_4709_4_33
Type: TC
Location: 41733 - 43058 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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