Cluster: HRGMv2_4709_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4709
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4709_4 | HRGMv2_4709_4_11 | 14879 | 16909 | - | 2.A.67.4.1 |
| NULL(UNKNOWN) | HRGMv2_4709_4 | HRGMv2_4709_4_12 | 17101 | 17856 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4709_4 | HRGMv2_4709_4_13 | 17972 | 21025 | - | 2.A.6.2.17 |
| TC | HRGMv2_4709_4 | HRGMv2_4709_4_14 | 21022 | 22122 | - | 2.A.6.2.27 |
| TF | HRGMv2_4709_4 | HRGMv2_4709_4_15 | 22100 | 22633 | - | MarR |
| CAZyme | HRGMv2_4709_4 | HRGMv2_4709_4_16 | 22886 | 24040 | - | GH3 |
Gene ID: HRGMv2_4709_4_11
Type: TC
Location: 14879 - 16909 (-)
Type: TC
Location: 14879 - 16909 (-)
Gene ID: HRGMv2_4709_4_12
Type:
Location: 17101 - 17856 (-)
Type:
Location: 17101 - 17856 (-)
Gene ID: HRGMv2_4709_4_13
Type: TC
Location: 17972 - 21025 (-)
Type: TC
Location: 17972 - 21025 (-)
Gene ID: HRGMv2_4709_4_14
Type: TC
Location: 21022 - 22122 (-)
Type: TC
Location: 21022 - 22122 (-)
Gene ID: HRGMv2_4709_4_15
Type: TF
Location: 22100 - 22633 (-)
Type: TF
Location: 22100 - 22633 (-)
Gene ID: HRGMv2_4709_4_16
Type: CAZyme
Location: 22886 - 24040 (-)
Type: CAZyme
Location: 22886 - 24040 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
UBA2897
Species
UBA2897 sp022773425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.