Cluster: HRGMv2_4709_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4709
- CGC Family ID: CGCFAM_01929
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4709_4 | HRGMv2_4709_4_1 | 261 | 3740 | - | GH13_39 |
| TC | HRGMv2_4709_4 | HRGMv2_4709_4_2 | 3859 | 5466 | - | 1.B.23.1.18 |
| pfam | HRGMv2_4709_4 | HRGMv2_4709_4_3 | 5648 | 6421 | - | Hydrolase_3 |
| CAZyme | HRGMv2_4709_4 | HRGMv2_4709_4_4 | 6418 | 8097 | - | GH13_31 |
| TC | HRGMv2_4709_4 | HRGMv2_4709_4_5 | 8112 | 10241 | - | 4.A.1.1.8 |
Gene ID: HRGMv2_4709_4_1
Type: CAZyme
Location: 261 - 3740 (-)
Type: CAZyme
Location: 261 - 3740 (-)
Gene ID: HRGMv2_4709_4_2
Type: TC
Location: 3859 - 5466 (-)
Type: TC
Location: 3859 - 5466 (-)
Gene ID: HRGMv2_4709_4_3
Type: pfam
Location: 5648 - 6421 (-)
Type: pfam
Location: 5648 - 6421 (-)
Gene ID: HRGMv2_4709_4_4
Type: CAZyme
Location: 6418 - 8097 (-)
Type: CAZyme
Location: 6418 - 8097 (-)
Gene ID: HRGMv2_4709_4_5
Type: TC
Location: 8112 - 10241 (-)
Type: TC
Location: 8112 - 10241 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
UBA2897
Species
UBA2897 sp022773425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.