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Cluster: HRGMv2_4709_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4709_2 HRGMv2_4709_2_109 131090 131782 + GT2
CAZyme HRGMv2_4709_2 HRGMv2_4709_2_110 131785 133542 + GT41
pfam HRGMv2_4709_2 HRGMv2_4709_2_111 133709 133999 + zf_Tbcl | zf_Tbcl_2
TC HRGMv2_4709_2 HRGMv2_4709_2_112 134189 134977 + 3.A.1.3.2
TC HRGMv2_4709_2 HRGMv2_4709_2_113 135018 135683 + 3.A.1.3.17
TC HRGMv2_4709_2 HRGMv2_4709_2_114 135670 136389 + 3.A.1.3.25
pfam HRGMv2_4709_2 HRGMv2_4709_2_115 136580 137131 + Ribosomal_S30AE | Ribosom_S30AE_C
TC HRGMv2_4709_2 HRGMv2_4709_2_116 137319 139961 + 3.A.5.1.3
Gene ID: HRGMv2_4709_2_109
Type: CAZyme
Location: 131090 - 131782 (+)
Gene ID: HRGMv2_4709_2_110
Type: CAZyme
Location: 131785 - 133542 (+)
Gene ID: HRGMv2_4709_2_111
Type: pfam
Location: 133709 - 133999 (+)
Gene ID: HRGMv2_4709_2_112
Type: TC
Location: 134189 - 134977 (+)
Gene ID: HRGMv2_4709_2_113
Type: TC
Location: 135018 - 135683 (+)
Gene ID: HRGMv2_4709_2_114
Type: TC
Location: 135670 - 136389 (+)
Gene ID: HRGMv2_4709_2_115
Type: pfam
Location: 136580 - 137131 (+)
Gene ID: HRGMv2_4709_2_116
Type: TC
Location: 137319 - 139961 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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