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Cluster: HRGMv2_4709_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4709_13 HRGMv2_4709_13_24 26703 28298 + 3.A.6.2.1
pfam HRGMv2_4709_13 HRGMv2_4709_13_25 28302 29327 + FliG_C | FliG_M | FliG_N | FliG_N
pfam HRGMv2_4709_13 HRGMv2_4709_13_26 29320 30123 + FliH | T3SS_SCTL
TC HRGMv2_4709_13 HRGMv2_4709_13_27 30138 31451 + 3.A.6.3.1
pfam HRGMv2_4709_13 HRGMv2_4709_13_28 31457 31918 + FliJ
CAZyme HRGMv2_4709_13 HRGMv2_4709_13_29 31915 32532 + GH23
Gene ID: HRGMv2_4709_13_24
Type: TC
Location: 26703 - 28298 (+)
Gene ID: HRGMv2_4709_13_25
Type: pfam
Location: 28302 - 29327 (+)
Gene ID: HRGMv2_4709_13_26
Type: pfam
Location: 29320 - 30123 (+)
Gene ID: HRGMv2_4709_13_27
Type: TC
Location: 30138 - 31451 (+)
Gene ID: HRGMv2_4709_13_28
Type: pfam
Location: 31457 - 31918 (+)
Gene ID: HRGMv2_4709_13_29
Type: CAZyme
Location: 31915 - 32532 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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