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Cluster: HRGMv2_4709_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4709_11 HRGMv2_4709_11_49 55597 56313 - 3.A.1.4.10
TC HRGMv2_4709_11 HRGMv2_4709_11_50 56313 57098 - 3.A.1.4.10
TC HRGMv2_4709_11 HRGMv2_4709_11_51 57091 58044 - 3.A.1.4.10
TC HRGMv2_4709_11 HRGMv2_4709_11_52 58055 58939 - 3.A.1.4.10
TC HRGMv2_4709_11 HRGMv2_4709_11_53 59009 60184 - 3.A.1.4.10
CAZyme HRGMv2_4709_11 HRGMv2_4709_11_54 60368 61777 - GH84
TC HRGMv2_4709_11 HRGMv2_4709_11_55 62074 63750 - 2.A.114.1.3
Gene ID: HRGMv2_4709_11_49
Type: TC
Location: 55597 - 56313 (-)
Gene ID: HRGMv2_4709_11_50
Type: TC
Location: 56313 - 57098 (-)
Gene ID: HRGMv2_4709_11_51
Type: TC
Location: 57091 - 58044 (-)
Gene ID: HRGMv2_4709_11_52
Type: TC
Location: 58055 - 58939 (-)
Gene ID: HRGMv2_4709_11_53
Type: TC
Location: 59009 - 60184 (-)
Gene ID: HRGMv2_4709_11_54
Type: CAZyme
Location: 60368 - 61777 (-)
Gene ID: HRGMv2_4709_11_55
Type: TC
Location: 62074 - 63750 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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