Cluster: HRGMv2_4709_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4709
- CGC Family ID: CGCFAM_02242
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4709_11 | HRGMv2_4709_11_14 | 15011 | 15820 | - | 2.A.64.1.3 |
| TC | HRGMv2_4709_11 | HRGMv2_4709_11_15 | 15988 | 16209 | - | 2.A.64.3.1 |
| CAZyme | HRGMv2_4709_11 | HRGMv2_4709_11_16 | 16359 | 19826 | - | CBM34 | GH13_39 | GH77 |
| CAZyme | HRGMv2_4709_11 | HRGMv2_4709_11_17 | 19948 | 21387 | - | GT5 |
| CAZyme | HRGMv2_4709_11 | HRGMv2_4709_11_18 | 21501 | 23408 | - | CBM48 | GH13_9 |
| CAZyme | HRGMv2_4709_11 | HRGMv2_4709_11_19 | 23454 | 25922 | - | GT35 |
Gene ID: HRGMv2_4709_11_14
Type: TC
Location: 15011 - 15820 (-)
Type: TC
Location: 15011 - 15820 (-)
Gene ID: HRGMv2_4709_11_15
Type: TC
Location: 15988 - 16209 (-)
Type: TC
Location: 15988 - 16209 (-)
Gene ID: HRGMv2_4709_11_16
Type: CAZyme
Location: 16359 - 19826 (-)
Type: CAZyme
Location: 16359 - 19826 (-)
Gene ID: HRGMv2_4709_11_17
Type: CAZyme
Location: 19948 - 21387 (-)
Type: CAZyme
Location: 19948 - 21387 (-)
Gene ID: HRGMv2_4709_11_18
Type: CAZyme
Location: 21501 - 23408 (-)
Type: CAZyme
Location: 21501 - 23408 (-)
Gene ID: HRGMv2_4709_11_19
Type: CAZyme
Location: 23454 - 25922 (-)
Type: CAZyme
Location: 23454 - 25922 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
UBA2897
Species
UBA2897 sp022773425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.