Cluster: HRGMv2_4708_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4708
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4708_29 | HRGMv2_4708_29_7 | 6120 | 7154 | + | GT2 |
| TC | HRGMv2_4708_29 | HRGMv2_4708_29_8 | 7151 | 8101 | + | 2.A.115.1.2 |
| pfam | HRGMv2_4708_29 | HRGMv2_4708_29_9 | 8154 | 8978 | + | Lactamase_B |
| TC | HRGMv2_4708_29 | HRGMv2_4708_29_10 | 8999 | 10339 | + | 2.A.8.1.6 |
| pfam | HRGMv2_4708_29 | HRGMv2_4708_29_11 | 10355 | 11497 | + | Gly_kinase |
| TC | HRGMv2_4708_29 | HRGMv2_4708_29_12 | 11555 | 12916 | - | 2.A.21.2.3 |
Gene ID: HRGMv2_4708_29_7
Type: CAZyme
Location: 6120 - 7154 (+)
Type: CAZyme
Location: 6120 - 7154 (+)
Gene ID: HRGMv2_4708_29_8
Type: TC
Location: 7151 - 8101 (+)
Type: TC
Location: 7151 - 8101 (+)
Gene ID: HRGMv2_4708_29_9
Type: pfam
Location: 8154 - 8978 (+)
Type: pfam
Location: 8154 - 8978 (+)
Gene ID: HRGMv2_4708_29_10
Type: TC
Location: 8999 - 10339 (+)
Type: TC
Location: 8999 - 10339 (+)
Gene ID: HRGMv2_4708_29_11
Type: pfam
Location: 10355 - 11497 (+)
Type: pfam
Location: 10355 - 11497 (+)
Gene ID: HRGMv2_4708_29_12
Type: TC
Location: 11555 - 12916 (-)
Type: TC
Location: 11555 - 12916 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
CAJPQU01
Species
CAJPQU01 sp905373705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.