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Cluster: HRGMv2_4708_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4708_21 HRGMv2_4708_21_1 1 1290 + GT41
NULL(UNKNOWN) HRGMv2_4708_21 HRGMv2_4708_21_2 1428 2600 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4708_21 HRGMv2_4708_21_3 2600 4225 + GT41
NULL(UNKNOWN) HRGMv2_4708_21 HRGMv2_4708_21_4 4280 5185 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4708_21 HRGMv2_4708_21_5 5175 5858 + GT2
CAZyme HRGMv2_4708_21 HRGMv2_4708_21_6 5874 7682 + GT2
NULL(UNKNOWN) HRGMv2_4708_21 HRGMv2_4708_21_7 7938 10304 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4708_21 HRGMv2_4708_21_8 10297 11277 + 9.B.18.2.1
Gene ID: HRGMv2_4708_21_1
Type: CAZyme
Location: 1 - 1290 (+)
Gene ID: HRGMv2_4708_21_2
Type:
Location: 1428 - 2600 (+)
Gene ID: HRGMv2_4708_21_3
Type: CAZyme
Location: 2600 - 4225 (+)
Gene ID: HRGMv2_4708_21_4
Type:
Location: 4280 - 5185 (+)
Gene ID: HRGMv2_4708_21_5
Type: CAZyme
Location: 5175 - 5858 (+)
Gene ID: HRGMv2_4708_21_6
Type: CAZyme
Location: 5874 - 7682 (+)
Gene ID: HRGMv2_4708_21_7
Type:
Location: 7938 - 10304 (+)
Gene ID: HRGMv2_4708_21_8
Type: TC
Location: 10297 - 11277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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