Cluster: HRGMv2_4708_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4708
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4708_11 | HRGMv2_4708_11_11 | 9417 | 10535 | - | GT28 |
| pfam | HRGMv2_4708_11 | HRGMv2_4708_11_12 | 10544 | 11971 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_4708_11 | HRGMv2_4708_11_13 | 11976 | 12935 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4708_11_11
Type: CAZyme
Location: 9417 - 10535 (-)
Type: CAZyme
Location: 9417 - 10535 (-)
Gene ID: HRGMv2_4708_11_12
Type: pfam
Location: 10544 - 11971 (-)
Type: pfam
Location: 10544 - 11971 (-)
Gene ID: HRGMv2_4708_11_13
Type: TC
Location: 11976 - 12935 (-)
Type: TC
Location: 11976 - 12935 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
CAJPQU01
Species
CAJPQU01 sp905373705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.