Cluster: HRGMv2_4708_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4708
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4708_8 | HRGMv2_4708_8_1 | 3 | 821 | + | 3.A.1.203.4 |
| CAZyme | HRGMv2_4708_8 | HRGMv2_4708_8_2 | 952 | 2187 | + | GT112 |
| pfam | HRGMv2_4708_8 | HRGMv2_4708_8_3 | 2292 | 2555 | + | DUF997 |
| TC | HRGMv2_4708_8 | HRGMv2_4708_8_4 | 2542 | 4038 | + | 2.A.21.1.1 |
Gene ID: HRGMv2_4708_8_1
Type: TC
Location: 3 - 821 (+)
Type: TC
Location: 3 - 821 (+)
Gene ID: HRGMv2_4708_8_2
Type: CAZyme
Location: 952 - 2187 (+)
Type: CAZyme
Location: 952 - 2187 (+)
Gene ID: HRGMv2_4708_8_3
Type: pfam
Location: 2292 - 2555 (+)
Type: pfam
Location: 2292 - 2555 (+)
Gene ID: HRGMv2_4708_8_4
Type: TC
Location: 2542 - 4038 (+)
Type: TC
Location: 2542 - 4038 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
CAJPQU01
Species
CAJPQU01 sp905373705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.