Cluster: HRGMv2_4708_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4708
- CGC Family ID: CGCFAM_00279
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4708_44 | HRGMv2_4708_44_3 | 1063 | 2304 | - | GT2 |
| pfam | HRGMv2_4708_44 | HRGMv2_4708_44_4 | 2366 | 3067 | - | CDP-OH_P_transf |
| pfam | HRGMv2_4708_44 | HRGMv2_4708_44_5 | 3045 | 3689 | - | PS_Dcarbxylase |
| CAZyme | HRGMv2_4708_44 | HRGMv2_4708_44_6 | 3790 | 4521 | - | GT26 |
| TC | HRGMv2_4708_44 | HRGMv2_4708_44_7 | 4859 | 5812 | + | 1.A.35.3.4 |
Gene ID: HRGMv2_4708_44_3
Type: CAZyme
Location: 1063 - 2304 (-)
Type: CAZyme
Location: 1063 - 2304 (-)
Gene ID: HRGMv2_4708_44_4
Type: pfam
Location: 2366 - 3067 (-)
Type: pfam
Location: 2366 - 3067 (-)
Gene ID: HRGMv2_4708_44_5
Type: pfam
Location: 3045 - 3689 (-)
Type: pfam
Location: 3045 - 3689 (-)
Gene ID: HRGMv2_4708_44_6
Type: CAZyme
Location: 3790 - 4521 (-)
Type: CAZyme
Location: 3790 - 4521 (-)
Gene ID: HRGMv2_4708_44_7
Type: TC
Location: 4859 - 5812 (+)
Type: TC
Location: 4859 - 5812 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
CAJPQU01
Species
CAJPQU01 sp905373705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.