Cluster: HRGMv2_4707_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4707
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4707_106 | HRGMv2_4707_106_2 | 1712 | 2734 | + | GH18 |
| CAZyme | HRGMv2_4707_106 | HRGMv2_4707_106_3 | 2760 | 4697 | + | CE4 |
| NULL(UNKNOWN) | HRGMv2_4707_106 | HRGMv2_4707_106_4 | 4866 | 5591 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4707_106 | HRGMv2_4707_106_5 | 5601 | 6809 | - | 2.A.23.1.5 |
| TC | HRGMv2_4707_106 | HRGMv2_4707_106_6 | 7018 | 7473 | - | 9.B.20.1.4 |
Gene ID: HRGMv2_4707_106_2
Type: CAZyme
Location: 1712 - 2734 (+)
Type: CAZyme
Location: 1712 - 2734 (+)
Gene ID: HRGMv2_4707_106_3
Type: CAZyme
Location: 2760 - 4697 (+)
Type: CAZyme
Location: 2760 - 4697 (+)
Gene ID: HRGMv2_4707_106_4
Type:
Location: 4866 - 5591 (-)
Type:
Location: 4866 - 5591 (-)
Gene ID: HRGMv2_4707_106_5
Type: TC
Location: 5601 - 6809 (-)
Type: TC
Location: 5601 - 6809 (-)
Gene ID: HRGMv2_4707_106_6
Type: TC
Location: 7018 - 7473 (-)
Type: TC
Location: 7018 - 7473 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas
Species
Selenomonas sp905373085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.