Cluster: HRGMv2_4707_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4707
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4707_79 | HRGMv2_4707_79_1 | 113 | 3232 | - | GH2 |
| TC | HRGMv2_4707_79 | HRGMv2_4707_79_2 | 3346 | 4767 | - | 2.A.2.2.1 |
| TC | HRGMv2_4707_79 | HRGMv2_4707_79_3 | 4780 | 5385 | - | 2.A.115.2.14 |
| pfam | HRGMv2_4707_79 | HRGMv2_4707_79_4 | 5703 | 5957 | + | DUF4405 |
| TF | HRGMv2_4707_79 | HRGMv2_4707_79_5 | 6144 | 6926 | + | HTH_6 |
| TC | HRGMv2_4707_79 | HRGMv2_4707_79_6 | 7193 | 8977 | + | 4.A.1.1.8 |
Gene ID: HRGMv2_4707_79_1
Type: CAZyme
Location: 113 - 3232 (-)
Type: CAZyme
Location: 113 - 3232 (-)
Gene ID: HRGMv2_4707_79_2
Type: TC
Location: 3346 - 4767 (-)
Type: TC
Location: 3346 - 4767 (-)
Gene ID: HRGMv2_4707_79_3
Type: TC
Location: 4780 - 5385 (-)
Type: TC
Location: 4780 - 5385 (-)
Gene ID: HRGMv2_4707_79_4
Type: pfam
Location: 5703 - 5957 (+)
Type: pfam
Location: 5703 - 5957 (+)
Gene ID: HRGMv2_4707_79_5
Type: TF
Location: 6144 - 6926 (+)
Type: TF
Location: 6144 - 6926 (+)
Gene ID: HRGMv2_4707_79_6
Type: TC
Location: 7193 - 8977 (+)
Type: TC
Location: 7193 - 8977 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas
Species
Selenomonas sp905373085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.