dbCAN Logo

Cluster: HRGMv2_4706_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4706_3 HRGMv2_4706_3_31 43219 45714 - GH2
pfam HRGMv2_4706_3 HRGMv2_4706_3_32 45917 47026 - OrfB_IS605 | Cas12f1-like_TNB | HTH_OrfB_IS605
pfam HRGMv2_4706_3 HRGMv2_4706_3_33 47558 48094 - Glyco_hydro_2_N
TC HRGMv2_4706_3 HRGMv2_4706_3_34 48135 49589 - 2.A.3.7.4
TF HRGMv2_4706_3 HRGMv2_4706_3_35 49877 50734 + HTH_AraC | HTH_AraC
TF HRGMv2_4706_3 HRGMv2_4706_3_36 51084 52142 - HTH_AraC | HTH_AraC
TC HRGMv2_4706_3 HRGMv2_4706_3_37 52331 53608 + 2.A.1.1.27
CAZyme HRGMv2_4706_3 HRGMv2_4706_3_38 53629 56250 + CBM67 | GH78
pfam HRGMv2_4706_3 HRGMv2_4706_3_39 56293 57771 - DUF5060 | DUF5605
TC HRGMv2_4706_3 HRGMv2_4706_3_40 57793 59157 - 2.A.2.3.7
Gene ID: HRGMv2_4706_3_31
Type: CAZyme
Location: 43219 - 45714 (-)
Gene ID: HRGMv2_4706_3_32
Type: pfam
Location: 45917 - 47026 (-)
Gene ID: HRGMv2_4706_3_33
Type: pfam
Location: 47558 - 48094 (-)
Gene ID: HRGMv2_4706_3_34
Type: TC
Location: 48135 - 49589 (-)
Gene ID: HRGMv2_4706_3_35
Type: TF
Location: 49877 - 50734 (+)
Gene ID: HRGMv2_4706_3_36
Type: TF
Location: 51084 - 52142 (-)
Gene ID: HRGMv2_4706_3_37
Type: TC
Location: 52331 - 53608 (+)
Gene ID: HRGMv2_4706_3_38
Type: CAZyme
Location: 53629 - 56250 (+)
Gene ID: HRGMv2_4706_3_39
Type: pfam
Location: 56293 - 57771 (-)
Gene ID: HRGMv2_4706_3_40
Type: TC
Location: 57793 - 59157 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List