Cluster: HRGMv2_4706_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_3 | HRGMv2_4706_3_20 | 24180 | 27302 | - | CBM61 | CBM61 | GH53 |
| pfam | HRGMv2_4706_3 | HRGMv2_4706_3_21 | 27334 | 28797 | - | SLH |
| TC | HRGMv2_4706_3 | HRGMv2_4706_3_22 | 28828 | 30345 | - | 1.B.23.1.23 |
| CAZyme | HRGMv2_4706_3 | HRGMv2_4706_3_23 | 30429 | 32762 | - | GH35 |
| TC | HRGMv2_4706_3 | HRGMv2_4706_3_24 | 32812 | 34053 | - | 2.A.1.5.1 |
Gene ID: HRGMv2_4706_3_20
Type: CAZyme
Location: 24180 - 27302 (-)
Type: CAZyme
Location: 24180 - 27302 (-)
Gene ID: HRGMv2_4706_3_21
Type: pfam
Location: 27334 - 28797 (-)
Type: pfam
Location: 27334 - 28797 (-)
Gene ID: HRGMv2_4706_3_22
Type: TC
Location: 28828 - 30345 (-)
Type: TC
Location: 28828 - 30345 (-)
Gene ID: HRGMv2_4706_3_23
Type: CAZyme
Location: 30429 - 32762 (-)
Type: CAZyme
Location: 30429 - 32762 (-)
Gene ID: HRGMv2_4706_3_24
Type: TC
Location: 32812 - 34053 (-)
Type: TC
Location: 32812 - 34053 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.