Cluster: HRGMv2_4706_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_1 | HRGMv2_4706_1_145 | 158323 | 159318 | + | GH43_26 |
| TC | HRGMv2_4706_1 | HRGMv2_4706_1_146 | 159328 | 160566 | + | 2.A.1.5.2 |
| pfam | HRGMv2_4706_1 | HRGMv2_4706_1_147 | 160621 | 161415 | - | S6PP | Hydrolase_3 |
| TF | HRGMv2_4706_1 | HRGMv2_4706_1_148 | 161415 | 162194 | - | HTH_DeoR |
| TC | HRGMv2_4706_1 | HRGMv2_4706_1_149 | 162747 | 164174 | + | 2.A.1.1.26 |
| TC | HRGMv2_4706_1 | HRGMv2_4706_1_150 | 164190 | 164501 | + | 4.A.3.2.4 |
Gene ID: HRGMv2_4706_1_145
Type: CAZyme
Location: 158323 - 159318 (+)
Type: CAZyme
Location: 158323 - 159318 (+)
Gene ID: HRGMv2_4706_1_146
Type: TC
Location: 159328 - 160566 (+)
Type: TC
Location: 159328 - 160566 (+)
Gene ID: HRGMv2_4706_1_147
Type: pfam
Location: 160621 - 161415 (-)
Type: pfam
Location: 160621 - 161415 (-)
Gene ID: HRGMv2_4706_1_148
Type: TF
Location: 161415 - 162194 (-)
Type: TF
Location: 161415 - 162194 (-)
Gene ID: HRGMv2_4706_1_149
Type: TC
Location: 162747 - 164174 (+)
Type: TC
Location: 162747 - 164174 (+)
Gene ID: HRGMv2_4706_1_150
Type: TC
Location: 164190 - 164501 (+)
Type: TC
Location: 164190 - 164501 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.