Cluster: HRGMv2_4706_CGC37
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_37 | HRGMv2_4706_37_1 | 139 | 2391 | - | GH36 |
| TC | HRGMv2_4706_37 | HRGMv2_4706_37_2 | 2694 | 4607 | + | 3.A.1.120.6 |
| pfam | HRGMv2_4706_37 | HRGMv2_4706_37_3 | 4650 | 6035 | - | ThrE | ThrE_2 | ThrE_2 |
| pfam | HRGMv2_4706_37 | HRGMv2_4706_37_4 | 6113 | 7447 | - | ThrE | ThrE_2 | ThrE_2 |
| TC | HRGMv2_4706_37 | HRGMv2_4706_37_5 | 7694 | 8035 | + | 2.A.7.1.9 |
Gene ID: HRGMv2_4706_37_1
Type: CAZyme
Location: 139 - 2391 (-)
Type: CAZyme
Location: 139 - 2391 (-)
Gene ID: HRGMv2_4706_37_2
Type: TC
Location: 2694 - 4607 (+)
Type: TC
Location: 2694 - 4607 (+)
Gene ID: HRGMv2_4706_37_3
Type: pfam
Location: 4650 - 6035 (-)
Type: pfam
Location: 4650 - 6035 (-)
Gene ID: HRGMv2_4706_37_4
Type: pfam
Location: 6113 - 7447 (-)
Type: pfam
Location: 6113 - 7447 (-)
Gene ID: HRGMv2_4706_37_5
Type: TC
Location: 7694 - 8035 (+)
Type: TC
Location: 7694 - 8035 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.