Cluster: HRGMv2_4706_CGC35
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4706_27 | HRGMv2_4706_27_1 | 239 | 613 | + | 1.A.43.1.1 |
| pfam | HRGMv2_4706_27 | HRGMv2_4706_27_2 | 676 | 1131 | - | DUF441 |
| TC | HRGMv2_4706_27 | HRGMv2_4706_27_3 | 1330 | 2127 | + | 3.A.1.3.27 |
| TC | HRGMv2_4706_27 | HRGMv2_4706_27_4 | 2193 | 3071 | - | 2.A.7.3.31 |
| pfam | HRGMv2_4706_27 | HRGMv2_4706_27_5 | 3255 | 3896 | + | Flavin_Reduct | RUBY_RBDX |
| pfam | HRGMv2_4706_27 | HRGMv2_4706_27_6 | 3931 | 4350 | - | YgbA_NO |
| TC | HRGMv2_4706_27 | HRGMv2_4706_27_7 | 4528 | 5589 | + | 3.A.1.24.1 |
| TC | HRGMv2_4706_27 | HRGMv2_4706_27_8 | 5558 | 6211 | + | 3.A.1.24.5 |
| TC | HRGMv2_4706_27 | HRGMv2_4706_27_9 | 6242 | 7054 | + | 3.A.1.24.5 |
| CAZyme | HRGMv2_4706_27 | HRGMv2_4706_27_10 | 7189 | 8778 | + | GH13_4 |
| TC | HRGMv2_4706_27 | HRGMv2_4706_27_11 | 8824 | 10134 | - | 9.A.40.2.2 |
| TC | HRGMv2_4706_27 | HRGMv2_4706_27_12 | 10550 | 11854 | + | 2.A.45.2.4 |
Gene ID: HRGMv2_4706_27_1
Type: TC
Location: 239 - 613 (+)
Type: TC
Location: 239 - 613 (+)
Gene ID: HRGMv2_4706_27_2
Type: pfam
Location: 676 - 1131 (-)
Type: pfam
Location: 676 - 1131 (-)
Gene ID: HRGMv2_4706_27_3
Type: TC
Location: 1330 - 2127 (+)
Type: TC
Location: 1330 - 2127 (+)
Gene ID: HRGMv2_4706_27_4
Type: TC
Location: 2193 - 3071 (-)
Type: TC
Location: 2193 - 3071 (-)
Gene ID: HRGMv2_4706_27_5
Type: pfam
Location: 3255 - 3896 (+)
Type: pfam
Location: 3255 - 3896 (+)
Gene ID: HRGMv2_4706_27_6
Type: pfam
Location: 3931 - 4350 (-)
Type: pfam
Location: 3931 - 4350 (-)
Gene ID: HRGMv2_4706_27_7
Type: TC
Location: 4528 - 5589 (+)
Type: TC
Location: 4528 - 5589 (+)
Gene ID: HRGMv2_4706_27_8
Type: TC
Location: 5558 - 6211 (+)
Type: TC
Location: 5558 - 6211 (+)
Gene ID: HRGMv2_4706_27_9
Type: TC
Location: 6242 - 7054 (+)
Type: TC
Location: 6242 - 7054 (+)
Gene ID: HRGMv2_4706_27_10
Type: CAZyme
Location: 7189 - 8778 (+)
Type: CAZyme
Location: 7189 - 8778 (+)
Gene ID: HRGMv2_4706_27_11
Type: TC
Location: 8824 - 10134 (-)
Type: TC
Location: 8824 - 10134 (-)
Gene ID: HRGMv2_4706_27_12
Type: TC
Location: 10550 - 11854 (+)
Type: TC
Location: 10550 - 11854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.