Cluster: HRGMv2_4706_CGC33
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4706_19 | HRGMv2_4706_19_8 | 7171 | 8595 | - | 2.A.2.2.1 |
| TC | HRGMv2_4706_19 | HRGMv2_4706_19_9 | 8770 | 9372 | - | 2.A.115.2.14 |
| CAZyme | HRGMv2_4706_19 | HRGMv2_4706_19_10 | 9939 | 11471 | - | GH31_19 |
| TC | HRGMv2_4706_19 | HRGMv2_4706_19_11 | 11491 | 12909 | - | 2.A.2.2.1 |
| TF | HRGMv2_4706_19 | HRGMv2_4706_19_12 | 13208 | 14065 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4706_19 | HRGMv2_4706_19_13 | 14152 | 14892 | - | 3.A.1.17.4 |
| TC | HRGMv2_4706_19 | HRGMv2_4706_19_14 | 14882 | 15619 | - | 3.A.1.16.2 |
| STP | HRGMv2_4706_19 | HRGMv2_4706_19_15 | 15616 | 16563 | - | SBP_bac_3 |
| STP | HRGMv2_4706_19 | HRGMv2_4706_19_16 | 16691 | 20215 | - | Fer4 |
| TC | HRGMv2_4706_19 | HRGMv2_4706_19_17 | 20418 | 21407 | - | 8.A.5.1.1 |
| TF | HRGMv2_4706_19 | HRGMv2_4706_19_18 | 21504 | 21923 | + | MerR |
| pfam | HRGMv2_4706_19 | HRGMv2_4706_19_19 | 22069 | 22857 | - | SAM_MT |
| TC | HRGMv2_4706_19 | HRGMv2_4706_19_20 | 22872 | 23408 | - | 3.A.1.25.5 |
Gene ID: HRGMv2_4706_19_8
Type: TC
Location: 7171 - 8595 (-)
Type: TC
Location: 7171 - 8595 (-)
Gene ID: HRGMv2_4706_19_9
Type: TC
Location: 8770 - 9372 (-)
Type: TC
Location: 8770 - 9372 (-)
Gene ID: HRGMv2_4706_19_10
Type: CAZyme
Location: 9939 - 11471 (-)
Type: CAZyme
Location: 9939 - 11471 (-)
Gene ID: HRGMv2_4706_19_11
Type: TC
Location: 11491 - 12909 (-)
Type: TC
Location: 11491 - 12909 (-)
Gene ID: HRGMv2_4706_19_12
Type: TF
Location: 13208 - 14065 (+)
Type: TF
Location: 13208 - 14065 (+)
Gene ID: HRGMv2_4706_19_13
Type: TC
Location: 14152 - 14892 (-)
Type: TC
Location: 14152 - 14892 (-)
Gene ID: HRGMv2_4706_19_14
Type: TC
Location: 14882 - 15619 (-)
Type: TC
Location: 14882 - 15619 (-)
Gene ID: HRGMv2_4706_19_15
Type: STP
Location: 15616 - 16563 (-)
Type: STP
Location: 15616 - 16563 (-)
Gene ID: HRGMv2_4706_19_16
Type: STP
Location: 16691 - 20215 (-)
Type: STP
Location: 16691 - 20215 (-)
Gene ID: HRGMv2_4706_19_17
Type: TC
Location: 20418 - 21407 (-)
Type: TC
Location: 20418 - 21407 (-)
Gene ID: HRGMv2_4706_19_18
Type: TF
Location: 21504 - 21923 (+)
Type: TF
Location: 21504 - 21923 (+)
Gene ID: HRGMv2_4706_19_19
Type: pfam
Location: 22069 - 22857 (-)
Type: pfam
Location: 22069 - 22857 (-)
Gene ID: HRGMv2_4706_19_20
Type: TC
Location: 22872 - 23408 (-)
Type: TC
Location: 22872 - 23408 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.