Cluster: HRGMv2_4706_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4706
- CGC Family ID: CGCFAM_00562
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4706_17 | HRGMv2_4706_17_3 | 1297 | 2703 | + | 9.B.18.1.3 |
| pfam | HRGMv2_4706_17 | HRGMv2_4706_17_4 | 2706 | 4067 | + | NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix |
| CAZyme | HRGMv2_4706_17 | HRGMv2_4706_17_5 | 4089 | 5222 | + | GT4 |
| pfam | HRGMv2_4706_17 | HRGMv2_4706_17_6 | 5227 | 6402 | + | Radical_SAM | SPASM |
| CAZyme | HRGMv2_4706_17 | HRGMv2_4706_17_7 | 6418 | 7563 | + | GT4 |
Gene ID: HRGMv2_4706_17_3
Type: TC
Location: 1297 - 2703 (+)
Type: TC
Location: 1297 - 2703 (+)
Gene ID: HRGMv2_4706_17_4
Type: pfam
Location: 2706 - 4067 (+)
Type: pfam
Location: 2706 - 4067 (+)
Gene ID: HRGMv2_4706_17_5
Type: CAZyme
Location: 4089 - 5222 (+)
Type: CAZyme
Location: 4089 - 5222 (+)
Gene ID: HRGMv2_4706_17_6
Type: pfam
Location: 5227 - 6402 (+)
Type: pfam
Location: 5227 - 6402 (+)
Gene ID: HRGMv2_4706_17_7
Type: CAZyme
Location: 6418 - 7563 (+)
Type: CAZyme
Location: 6418 - 7563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.