Cluster: HRGMv2_4706_CGC29
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4706_16 | HRGMv2_4706_16_3 | 1573 | 3642 | - | 4.A.1.1.8 |
| CAZyme | HRGMv2_4706_16 | HRGMv2_4706_16_4 | 3776 | 5110 | - | GH4 |
| TF | HRGMv2_4706_16 | HRGMv2_4706_16_5 | 5359 | 6126 | - | HTH_6 |
| TC | HRGMv2_4706_16 | HRGMv2_4706_16_6 | 6204 | 7088 | - | 2.A.115.1.1 |
| TC | HRGMv2_4706_16 | HRGMv2_4706_16_7 | 7172 | 8758 | - | 3.A.1.12.8 |
| TC | HRGMv2_4706_16 | HRGMv2_4706_16_8 | 8755 | 9894 | - | 3.A.1.12.3 |
| NULL(UNKNOWN) | HRGMv2_4706_16 | HRGMv2_4706_16_9 | 10086 | 10286 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4706_16 | HRGMv2_4706_16_10 | 10338 | 12233 | - | 9.A.8.1.6 |
Gene ID: HRGMv2_4706_16_3
Type: TC
Location: 1573 - 3642 (-)
Type: TC
Location: 1573 - 3642 (-)
Gene ID: HRGMv2_4706_16_4
Type: CAZyme
Location: 3776 - 5110 (-)
Type: CAZyme
Location: 3776 - 5110 (-)
Gene ID: HRGMv2_4706_16_5
Type: TF
Location: 5359 - 6126 (-)
Type: TF
Location: 5359 - 6126 (-)
Gene ID: HRGMv2_4706_16_6
Type: TC
Location: 6204 - 7088 (-)
Type: TC
Location: 6204 - 7088 (-)
Gene ID: HRGMv2_4706_16_7
Type: TC
Location: 7172 - 8758 (-)
Type: TC
Location: 7172 - 8758 (-)
Gene ID: HRGMv2_4706_16_8
Type: TC
Location: 8755 - 9894 (-)
Type: TC
Location: 8755 - 9894 (-)
Gene ID: HRGMv2_4706_16_9
Type:
Location: 10086 - 10286 (-)
Type:
Location: 10086 - 10286 (-)
Gene ID: HRGMv2_4706_16_10
Type: TC
Location: 10338 - 12233 (-)
Type: TC
Location: 10338 - 12233 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.