dbCAN Logo

Cluster: HRGMv2_4706_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4706_15 HRGMv2_4706_15_1 383 1312 + 3.A.1.5.2
TC HRGMv2_4706_15 HRGMv2_4706_15_2 1314 2222 + 3.A.1.5.2
TC HRGMv2_4706_15 HRGMv2_4706_15_3 2248 3243 + 3.A.1.5.2
TC HRGMv2_4706_15 HRGMv2_4706_15_4 3240 4202 + 3.A.1.5.20
pfam HRGMv2_4706_15 HRGMv2_4706_15_5 4237 4629 - 4HBT | FlK
TC HRGMv2_4706_15 HRGMv2_4706_15_6 4921 6186 + 2.A.23.1.2
CAZyme HRGMv2_4706_15 HRGMv2_4706_15_7 6245 8209 - GH127
TC HRGMv2_4706_15 HRGMv2_4706_15_8 8242 9588 - 2.A.2.3.3
Gene ID: HRGMv2_4706_15_1
Type: TC
Location: 383 - 1312 (+)
Gene ID: HRGMv2_4706_15_2
Type: TC
Location: 1314 - 2222 (+)
Gene ID: HRGMv2_4706_15_3
Type: TC
Location: 2248 - 3243 (+)
Gene ID: HRGMv2_4706_15_4
Type: TC
Location: 3240 - 4202 (+)
Gene ID: HRGMv2_4706_15_5
Type: pfam
Location: 4237 - 4629 (-)
Gene ID: HRGMv2_4706_15_6
Type: TC
Location: 4921 - 6186 (+)
Gene ID: HRGMv2_4706_15_7
Type: CAZyme
Location: 6245 - 8209 (-)
Gene ID: HRGMv2_4706_15_8
Type: TC
Location: 8242 - 9588 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List