Cluster: HRGMv2_4706_CGC27
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_4706
- CGC Family ID: CGCFAM_00562
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_33 | 37494 | 38456 | - | GT2 |
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_34 | 39269 | 40264 | - | GT2 |
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_35 | 40410 | 41207 | - | GT32 |
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_36 | 41228 | 42034 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4706_14 | HRGMv2_4706_14_37 | 42404 | 43654 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_38 | 43647 | 44738 | - | GT4 |
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_39 | 44719 | 45855 | - | GT4 |
| pfam | HRGMv2_4706_14 | HRGMv2_4706_14_40 | 45881 | 47242 | - | NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix |
| TC | HRGMv2_4706_14 | HRGMv2_4706_14_41 | 47246 | 48658 | - | 9.B.18.1.2 |
| pfam | HRGMv2_4706_14 | HRGMv2_4706_14_42 | 48741 | 50111 | - | Wzz | GNVR |
| TC | HRGMv2_4706_14 | HRGMv2_4706_14_43 | 50126 | 50875 | - | 1.B.18.3.8 |
| TC | HRGMv2_4706_14 | HRGMv2_4706_14_44 | 51093 | 52580 | - | 2.A.35.2.1 |
Gene ID: HRGMv2_4706_14_33
Type: CAZyme
Location: 37494 - 38456 (-)
Type: CAZyme
Location: 37494 - 38456 (-)
Gene ID: HRGMv2_4706_14_34
Type: CAZyme
Location: 39269 - 40264 (-)
Type: CAZyme
Location: 39269 - 40264 (-)
Gene ID: HRGMv2_4706_14_35
Type: CAZyme
Location: 40410 - 41207 (-)
Type: CAZyme
Location: 40410 - 41207 (-)
Gene ID: HRGMv2_4706_14_36
Type: CAZyme
Location: 41228 - 42034 (-)
Type: CAZyme
Location: 41228 - 42034 (-)
Gene ID: HRGMv2_4706_14_37
Type:
Location: 42404 - 43654 (-)
Type:
Location: 42404 - 43654 (-)
Gene ID: HRGMv2_4706_14_38
Type: CAZyme
Location: 43647 - 44738 (-)
Type: CAZyme
Location: 43647 - 44738 (-)
Gene ID: HRGMv2_4706_14_39
Type: CAZyme
Location: 44719 - 45855 (-)
Type: CAZyme
Location: 44719 - 45855 (-)
Gene ID: HRGMv2_4706_14_40
Type: pfam
Location: 45881 - 47242 (-)
Type: pfam
Location: 45881 - 47242 (-)
Gene ID: HRGMv2_4706_14_41
Type: TC
Location: 47246 - 48658 (-)
Type: TC
Location: 47246 - 48658 (-)
Gene ID: HRGMv2_4706_14_42
Type: pfam
Location: 48741 - 50111 (-)
Type: pfam
Location: 48741 - 50111 (-)
Gene ID: HRGMv2_4706_14_43
Type: TC
Location: 50126 - 50875 (-)
Type: TC
Location: 50126 - 50875 (-)
Gene ID: HRGMv2_4706_14_44
Type: TC
Location: 51093 - 52580 (-)
Type: TC
Location: 51093 - 52580 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.