Cluster: HRGMv2_4706_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4706
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_27 | 30679 | 31272 | + | GH25 |
| pfam | HRGMv2_4706_14 | HRGMv2_4706_14_28 | 31332 | 32351 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | HRGMv2_4706_14 | HRGMv2_4706_14_29 | 32496 | 34037 | - | 2.A.66.1.40 |
Gene ID: HRGMv2_4706_14_27
Type: CAZyme
Location: 30679 - 31272 (+)
Type: CAZyme
Location: 30679 - 31272 (+)
Gene ID: HRGMv2_4706_14_28
Type: pfam
Location: 31332 - 32351 (-)
Type: pfam
Location: 31332 - 32351 (-)
Gene ID: HRGMv2_4706_14_29
Type: TC
Location: 32496 - 34037 (-)
Type: TC
Location: 32496 - 34037 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.