Cluster: HRGMv2_4706_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4706
- CGC Family ID: CGCFAM_01628
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_2 | 1677 | 2750 | - | GT4 |
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_3 | 2756 | 3733 | - | GT9 |
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_4 | 3823 | 4647 | + | CE4 |
| TC | HRGMv2_4706_14 | HRGMv2_4706_14_5 | 4795 | 5445 | - | 9.B.2.5.4 |
| TC | HRGMv2_4706_14 | HRGMv2_4706_14_6 | 5446 | 6075 | - | 9.B.2.5.4 |
| pfam | HRGMv2_4706_14 | HRGMv2_4706_14_7 | 6225 | 7241 | - | Stealth_CR2 | Stealth_CR1 |
| CAZyme | HRGMv2_4706_14 | HRGMv2_4706_14_8 | 7243 | 8262 | - | GT9 |
Gene ID: HRGMv2_4706_14_2
Type: CAZyme
Location: 1677 - 2750 (-)
Type: CAZyme
Location: 1677 - 2750 (-)
Gene ID: HRGMv2_4706_14_3
Type: CAZyme
Location: 2756 - 3733 (-)
Type: CAZyme
Location: 2756 - 3733 (-)
Gene ID: HRGMv2_4706_14_4
Type: CAZyme
Location: 3823 - 4647 (+)
Type: CAZyme
Location: 3823 - 4647 (+)
Gene ID: HRGMv2_4706_14_5
Type: TC
Location: 4795 - 5445 (-)
Type: TC
Location: 4795 - 5445 (-)
Gene ID: HRGMv2_4706_14_6
Type: TC
Location: 5446 - 6075 (-)
Type: TC
Location: 5446 - 6075 (-)
Gene ID: HRGMv2_4706_14_7
Type: pfam
Location: 6225 - 7241 (-)
Type: pfam
Location: 6225 - 7241 (-)
Gene ID: HRGMv2_4706_14_8
Type: CAZyme
Location: 7243 - 8262 (-)
Type: CAZyme
Location: 7243 - 8262 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.