Cluster: HRGMv2_4706_CGC21
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4706
- CGC Family ID: CGCFAM_07039
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_83 | 81788 | 83404 | + | 2.A.36.6.3 |
| pfam | HRGMv2_4706_10 | HRGMv2_4706_10_84 | 83447 | 84598 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_85 | 84779 | 85942 | - | 2.A.1.60.3 |
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_86 | 86064 | 86366 | - | 4.A.3.2.6 |
| CAZyme | HRGMv2_4706_10 | HRGMv2_4706_10_87 | 86552 | 87988 | - | GH1 |
| CAZyme | HRGMv2_4706_10 | HRGMv2_4706_10_88 | 88052 | 89491 | - | GH1 |
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_89 | 89519 | 89848 | - | 4.A.3.2.8 |
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_90 | 89868 | 90170 | - | 4.A.3.2.6 |
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_91 | 90210 | 91511 | - | 4.A.3.2.2 |
| TF | HRGMv2_4706_10 | HRGMv2_4706_10_92 | 91783 | 92670 | - | HTH_6 |
| CAZyme | HRGMv2_4706_10 | HRGMv2_4706_10_93 | 92766 | 94154 | - | GH4 |
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_94 | 94180 | 94503 | - | 4.A.3.2.7 |
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_95 | 94528 | 94830 | - | 4.A.3.2.6 |
| TC | HRGMv2_4706_10 | HRGMv2_4706_10_96 | 94869 | 96170 | - | 4.A.3.2.2 |
Gene ID: HRGMv2_4706_10_83
Type: TC
Location: 81788 - 83404 (+)
Type: TC
Location: 81788 - 83404 (+)
Gene ID: HRGMv2_4706_10_84
Type: pfam
Location: 83447 - 84598 (-)
Type: pfam
Location: 83447 - 84598 (-)
Gene ID: HRGMv2_4706_10_85
Type: TC
Location: 84779 - 85942 (-)
Type: TC
Location: 84779 - 85942 (-)
Gene ID: HRGMv2_4706_10_86
Type: TC
Location: 86064 - 86366 (-)
Type: TC
Location: 86064 - 86366 (-)
Gene ID: HRGMv2_4706_10_87
Type: CAZyme
Location: 86552 - 87988 (-)
Type: CAZyme
Location: 86552 - 87988 (-)
Gene ID: HRGMv2_4706_10_88
Type: CAZyme
Location: 88052 - 89491 (-)
Type: CAZyme
Location: 88052 - 89491 (-)
Gene ID: HRGMv2_4706_10_89
Type: TC
Location: 89519 - 89848 (-)
Type: TC
Location: 89519 - 89848 (-)
Gene ID: HRGMv2_4706_10_90
Type: TC
Location: 89868 - 90170 (-)
Type: TC
Location: 89868 - 90170 (-)
Gene ID: HRGMv2_4706_10_91
Type: TC
Location: 90210 - 91511 (-)
Type: TC
Location: 90210 - 91511 (-)
Gene ID: HRGMv2_4706_10_92
Type: TF
Location: 91783 - 92670 (-)
Type: TF
Location: 91783 - 92670 (-)
Gene ID: HRGMv2_4706_10_93
Type: CAZyme
Location: 92766 - 94154 (-)
Type: CAZyme
Location: 92766 - 94154 (-)
Gene ID: HRGMv2_4706_10_94
Type: TC
Location: 94180 - 94503 (-)
Type: TC
Location: 94180 - 94503 (-)
Gene ID: HRGMv2_4706_10_95
Type: TC
Location: 94528 - 94830 (-)
Type: TC
Location: 94528 - 94830 (-)
Gene ID: HRGMv2_4706_10_96
Type: TC
Location: 94869 - 96170 (-)
Type: TC
Location: 94869 - 96170 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.