Cluster: HRGMv2_4706_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4706_9 | HRGMv2_4706_9_63 | 61768 | 63537 | + | 2.A.16.2.2 |
| pfam | HRGMv2_4706_9 | HRGMv2_4706_9_64 | 63579 | 65093 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TF | HRGMv2_4706_9 | HRGMv2_4706_9_65 | 65289 | 66113 | + | HTH_AraC |
| CAZyme | HRGMv2_4706_9 | HRGMv2_4706_9_66 | 66291 | 68609 | + | GH31_3 |
| TC | HRGMv2_4706_9 | HRGMv2_4706_9_67 | 68942 | 70294 | + | 2.A.2.3.3 |
Gene ID: HRGMv2_4706_9_63
Type: TC
Location: 61768 - 63537 (+)
Type: TC
Location: 61768 - 63537 (+)
Gene ID: HRGMv2_4706_9_64
Type: pfam
Location: 63579 - 65093 (+)
Type: pfam
Location: 63579 - 65093 (+)
Gene ID: HRGMv2_4706_9_65
Type: TF
Location: 65289 - 66113 (+)
Type: TF
Location: 65289 - 66113 (+)
Gene ID: HRGMv2_4706_9_66
Type: CAZyme
Location: 66291 - 68609 (+)
Type: CAZyme
Location: 66291 - 68609 (+)
Gene ID: HRGMv2_4706_9_67
Type: TC
Location: 68942 - 70294 (+)
Type: TC
Location: 68942 - 70294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.