Cluster: HRGMv2_4706_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4706
- CGC Family ID: CGCFAM_00056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_9 | HRGMv2_4706_9_34 | 31611 | 32564 | - | GT2 |
| STP | HRGMv2_4706_9 | HRGMv2_4706_9_35 | 32575 | 33741 | - | Aminotran_1_2 |
| CAZyme | HRGMv2_4706_9 | HRGMv2_4706_9_36 | 33768 | 35417 | - | GT83 |
| TC | HRGMv2_4706_9 | HRGMv2_4706_9_37 | 35631 | 35996 | + | 2.A.7.33.3 |
| NULL(UNKNOWN) | HRGMv2_4706_9 | HRGMv2_4706_9_38 | 36016 | 36762 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4706_9 | HRGMv2_4706_9_39 | 36802 | 38484 | - | GT83 |
| STP | HRGMv2_4706_9 | HRGMv2_4706_9_40 | 38624 | 39901 | - | HATPase_c | HisKA |
| TC | HRGMv2_4706_9 | HRGMv2_4706_9_41 | 40325 | 41593 | + | 1.B.23.1.23 |
| pfam | HRGMv2_4706_9 | HRGMv2_4706_9_42 | 41613 | 43175 | + | Metallophos | Pur_ac_phosph_N |
| TF | HRGMv2_4706_9 | HRGMv2_4706_9_43 | 43297 | 43974 | - | Trans_reg_C |
| TC | HRGMv2_4706_9 | HRGMv2_4706_9_44 | 43994 | 44677 | - | 9.B.20.1.1 |
Gene ID: HRGMv2_4706_9_34
Type: CAZyme
Location: 31611 - 32564 (-)
Type: CAZyme
Location: 31611 - 32564 (-)
Gene ID: HRGMv2_4706_9_35
Type: STP
Location: 32575 - 33741 (-)
Type: STP
Location: 32575 - 33741 (-)
Gene ID: HRGMv2_4706_9_36
Type: CAZyme
Location: 33768 - 35417 (-)
Type: CAZyme
Location: 33768 - 35417 (-)
Gene ID: HRGMv2_4706_9_37
Type: TC
Location: 35631 - 35996 (+)
Type: TC
Location: 35631 - 35996 (+)
Gene ID: HRGMv2_4706_9_38
Type:
Location: 36016 - 36762 (+)
Type:
Location: 36016 - 36762 (+)
Gene ID: HRGMv2_4706_9_39
Type: CAZyme
Location: 36802 - 38484 (-)
Type: CAZyme
Location: 36802 - 38484 (-)
Gene ID: HRGMv2_4706_9_40
Type: STP
Location: 38624 - 39901 (-)
Type: STP
Location: 38624 - 39901 (-)
Gene ID: HRGMv2_4706_9_41
Type: TC
Location: 40325 - 41593 (+)
Type: TC
Location: 40325 - 41593 (+)
Gene ID: HRGMv2_4706_9_42
Type: pfam
Location: 41613 - 43175 (+)
Type: pfam
Location: 41613 - 43175 (+)
Gene ID: HRGMv2_4706_9_43
Type: TF
Location: 43297 - 43974 (-)
Type: TF
Location: 43297 - 43974 (-)
Gene ID: HRGMv2_4706_9_44
Type: TC
Location: 43994 - 44677 (-)
Type: TC
Location: 43994 - 44677 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.