Cluster: HRGMv2_4706_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4706
- CGC Family ID: CGCFAM_04631
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_6 | HRGMv2_4706_6_89 | 92357 | 95431 | - | GH2 |
| CAZyme | HRGMv2_4706_6 | HRGMv2_4706_6_90 | 95689 | 98769 | - | GH2 |
| TC | HRGMv2_4706_6 | HRGMv2_4706_6_91 | 98853 | 100229 | - | 2.A.2.1.1 |
| pfam | HRGMv2_4706_6 | HRGMv2_4706_6_92 | 100249 | 100722 | - | PTS_EIIA_2 |
| TF | HRGMv2_4706_6 | HRGMv2_4706_6_93 | 100915 | 101718 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4706_6 | HRGMv2_4706_6_94 | 101778 | 102698 | - | 2.A.6.4.3 |
| TC | HRGMv2_4706_6 | HRGMv2_4706_6_95 | 102698 | 103945 | - | 2.A.6.4.3 |
Gene ID: HRGMv2_4706_6_89
Type: CAZyme
Location: 92357 - 95431 (-)
Type: CAZyme
Location: 92357 - 95431 (-)
Gene ID: HRGMv2_4706_6_90
Type: CAZyme
Location: 95689 - 98769 (-)
Type: CAZyme
Location: 95689 - 98769 (-)
Gene ID: HRGMv2_4706_6_91
Type: TC
Location: 98853 - 100229 (-)
Type: TC
Location: 98853 - 100229 (-)
Gene ID: HRGMv2_4706_6_92
Type: pfam
Location: 100249 - 100722 (-)
Type: pfam
Location: 100249 - 100722 (-)
Gene ID: HRGMv2_4706_6_93
Type: TF
Location: 100915 - 101718 (+)
Type: TF
Location: 100915 - 101718 (+)
Gene ID: HRGMv2_4706_6_94
Type: TC
Location: 101778 - 102698 (-)
Type: TC
Location: 101778 - 102698 (-)
Gene ID: HRGMv2_4706_6_95
Type: TC
Location: 102698 - 103945 (-)
Type: TC
Location: 102698 - 103945 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.